J-Express Analysis Course, Bergen 28-30 March 2011

Summary

J-Express is an analysis suite for interpretation of high-throughput experiment data, commonly used for gene expression microarray analysis, but also applicable for other types of data.

 

Description

This is a course at the second level of NMC's course series. Participants should have attended a course at the introductory level or have equivalent background knowledge on microarray /highthroughput technology.

We intend to focus on practicals in this course, main topics to be covered are:

  • Working with J-Express functionality
  • Groups
  • Sub datasets
  • Use different analysis modules in sequence to investigate different parts of the data
  • Experimental design including practical exercise
  • Differential expression
  • SAM/t-test/Rank Product
  • Gene Set Enrichment  Analysis
  • Explorative methods (PCA / PLS / CA / clustering)

 

We encourage people who need early confirmation of acceptance to the course to register by 11th of March. We will then be able to prioritize a slot for you for instance if your travel to Bergen to attend the course. The final registration will end on March 18th.

The course is free of charge.

Place

Høyteknologisenteret i Bergen, datablock, FAKLAB1, ground floor

Prerequisites

Participants should have attended a course at the introductory level or have equivalent background knowledge on microarray technology

Organizers

Norwegian Microarray Consortium (NMC) and the FUGE Bioinformatics platform.

Contact Person(s)

Kjell Petersen (Kjell.Petersen@uni.no)

Rita Holdhus (Rita.Holdhus@uib.no)

Number of Seats

20

Dates

Registration Start
22/2/2011
Registration End
18/3/2011
Course Start
Mar. 28, 2011 9:00 am
Course End
Mar. 30, 2011 4:00 pm
Click here to go to Course Home Page

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About FUGE

FUGE is the Norwegian Functional Genomics program, funded by the Research Council of Norway, and supports several technology platforms.